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HomeProduct name list5-ETHYNYL-2'-DEOXYURIDINE

5-ETHYNYL-2'-DEOXYURIDINE

Synonym(s):EdU

  • CAS NO.:61135-33-9
  • Empirical Formula: C11H12N2O5
  • Molecular Weight: 252.22
  • MDL number: MFCD01675687
  • EINECS: 500-100-4
  • SAFETY DATA SHEET (SDS)
  • Update Date: 2024-11-19 20:33:22
5-ETHYNYL-2'-DEOXYURIDINE Structural

What is 5-ETHYNYL-2'-DEOXYURIDINE?

Description

5-Ethynyl-2′-deoxyuridine (61135-33-9) is a novel agent for fast and sensitive detection of DNA synthesis?in vivo.1 5-EdU is incorporated into proliferating cells followed by detection with a fluorescent azide using click ligation.1 In contrast to the use of BrdU, the new method does not require sample fixation or DNA denaturation. 5-Ethynyl-2′-deoxyuridine may be used for studying cell proliferation in the central nervous system and may be combined with BrdU staining in a novel protocol allowing for double labeling of DNA synthesis.2

The Uses of 5-ETHYNYL-2'-DEOXYURIDINE

5-Ethynyl-2’deoxyuridine is a extensively used nucleoside analog used as a probe for DNA synthesis. However, 5-Ethynyl-2’deoxyuridine is a toxic anti-metabolite, which potentially causes DNA instabi liy, necrosis and cell-cycle arrest, therefore it is often used for short-term DNA synthesis in tissue culture and living organisms where prolonged cell survival is not required.

The Uses of 5-ETHYNYL-2'-DEOXYURIDINE

5-Ethynyl-2′-deoxyuridine (EdU) is a thymidine analog that can be incorporated into replicating DNA for detection of cell proliferation. It has an alkyne handle that can ligate with azide-containing fluorescent probes through a highly efficient click chemistry reaction. EdU nucleoside can be incorporated into the DNA of cells either in culture or in animals without showing significant toxicity. The assay offers a simpler workflow for detecting cell proliferation than anti-BrdU assays.

For information on Baseclick kits containing all the reagents for the assays see: Baseclick kits

For a listing of the Baseclick kits see: Baseclick kits

What are the applications of Application

5-Ethynyl-2′-deoxyuridine is a nucleoside analog of thymidine, that is often used for short-term DNA synthesis in tissue culture

storage

Store at -20°C

References

1) Salic and Mitchison (2008),?A chemical method for fast and sensitive detection of DNA synthesis in vivo; Proc. Natl. Acad. Sci. USA,?105?2415 2) Zeng?et al. (2010),?Evaluation of 5-ethynyl-2′-deoxyuridine staining as a sensitive and reliable method for studying cell proliferation in the adult nervous system; Brain Res.,?1319C?21

Properties of 5-ETHYNYL-2'-DEOXYURIDINE

Melting point: 199°C(lit.)
Density  1.55±0.1 g/cm3(Predicted)
storage temp.  -20°C
solubility  Soluble in DMSO (up to 10 mg/ml).
pka 8.29±0.10(Predicted)
form  powder
color  White or off-white
Stability: Stable for 1 year from date of purchase as supplied. Solutions in DMSO may be stored at -20° for up to 2 months.
CAS DataBase Reference 61135-33-9

Safety information for 5-ETHYNYL-2'-DEOXYURIDINE

Signal word Danger
Pictogram(s)
ghs
Health Hazard
GHS08
GHS Hazard Statements H340:Germ cell mutagenicity
H361:Reproductive toxicity
Precautionary Statement Codes P201:Obtain special instructions before use.
P308+P313:IF exposed or concerned: Get medical advice/attention.

Computed Descriptors for 5-ETHYNYL-2'-DEOXYURIDINE

InChIKey CDEURGJCGCHYFH-DJLDLDEBSA-N

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