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HomeProduct name list3'-Deoxycytidine

3'-Deoxycytidine

3'-Deoxycytidine Structural

What is 3'-Deoxycytidine?

The Uses of 3'-Deoxycytidine

3''-Deoxycytidine is an inhibitor of nucleolar RNA synthesis but does not affect the appearance of mRNA. Displayed inhibitory properties against the replication of hepatitis C virus-like RNA template.

What are the applications of Application

3′-Deoxycytidine is a selective inhibitor of pre-ribosomal RNA in HeLa cells

Biological Activity

3'-Deoxycytidine is a pyrimidine analog of cordycepin. The structures of cordycepin and 3'-deoxycytidine resemble adenosine and cytidine except for the altered 3' position in the ribose moiety, where hydrogen is substituted for the hydroxyl group. 3'-deoxycytidine affects similar to that of cordycepin on nucleolar RNA formation and has approximately the same level of activity as the adenosine analog. 3'-deoxycytidine, like cordycepin, enters cells and is phosphorylated by the appropriate enzymes. 3'-Deoxycytidine shares with cordycepin the ability to inhibit nucleolar RNA synthesis, but it does not affect the appearance of mRNA. Neither compound affects heterogeneous nuclear RNA (HnRNA)[1].

References

[1] Herbert T. Abelson, Sheldon Penman. “Messenger RNA formation: Resistance to inhibition by 3′-deoxycytidine.” Biochimica et Biophysica Acta (BBA) - Nucleic Acids and Protein Synthesis 277 1 (1972): Pages 129-133.

Properties of 3'-Deoxycytidine

Melting point: 230-232 °C
Boiling point: 497.6±55.0 °C(Predicted)
Density  1.73±0.1 g/cm3(Predicted)
storage temp.  2-8°C
pka 14.01±0.60(Predicted)
form  Solid
color  White to light yellow
InChI InChI=1S/C9H13N3O4/c10-7-1-2-12(9(15)11-7)8-6(14)3-5(4-13)16-8/h1-2,5-6,8,13-14H,3-4H2,(H2,10,11,15)/t5-,6+,8+/m0/s1

Safety information for 3'-Deoxycytidine

Computed Descriptors for 3'-Deoxycytidine

InChIKey ZHHOTKZTEUZTHX-SHYZEUOFSA-N
SMILES OC[C@H]1O[C@@H](N2C=CC(N)=NC2=O)[C@H](O)C1

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